public class PhiComparator extends SequenceComparator
SequenceComparator
that uses phi scores to determine equivalence.Modifier and Type | Field and Description |
---|---|
(package private) double |
minPhi |
(package private) Scorer |
scorer |
Constructor and Description |
---|
PhiComparator(Scorer scorer,
double minPhi) |
Modifier and Type | Method and Description |
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boolean |
equals(Motif m1,
Motif m2)
Returns compare(m1, m2) == 0.
|
compare
double minPhi
Scorer scorer
public PhiComparator(Scorer scorer, double minPhi)
public boolean equals(Motif m1, Motif m2)
MotifComparator
equals
in class MotifComparator