public class EquivalenceComparator extends SequenceComparator
Motif.equivalentTo(Motif, double)
. The compare method is identical to that of SequenceComparator. That is, comparisons are based
on alphabetical order of sequences. No equivalence is taken into account.Modifier and Type | Field and Description |
---|---|
protected double |
minCoverage |
Constructor and Description |
---|
EquivalenceComparator() |
EquivalenceComparator(double minCov) |
Modifier and Type | Method and Description |
---|---|
boolean |
equals(Motif m1,
Motif m2)
Returns compare(m1, m2) == 0.
|
compare
public EquivalenceComparator()
public EquivalenceComparator(double minCov)
public boolean equals(Motif m1, Motif m2)
MotifComparator
equals
in class MotifComparator