public class PWMEvaluator
extends java.lang.Object
Outputs to the command-line statistics about the PWM found in the given CRE file for the given organism, using the given stringency.
Command-line parameters should be an organism, a CRE file name, and a stringency cutoff. See ModelEvaluator
for details of where
CRE files should be placed and how they should be formatted.
Modifier and Type | Field and Description |
---|---|
static int |
MAX_KMM_EXPANSION_SIZE |
Constructor and Description |
---|
PWMEvaluator() |
Modifier and Type | Method and Description |
---|---|
static void |
main(java.lang.String[] args) |
static void |
oldEvaluator(java.lang.String[] args) |
public static final int MAX_KMM_EXPANSION_SIZE
public static void main(java.lang.String[] args)
public static void oldEvaluator(java.lang.String[] args) throws java.io.IOException, UnknownGeneException, ExpansionTooLargeException
java.io.IOException
UnknownGeneException
ExpansionTooLargeException